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%% Lesson 2c: Numerical estimation of integrals and derivatives
% Numerical integration and differentiation are a staple of numerical
% computing. We will now see how easy these are in MATLAB!
clc; clear; close all;
%% The diff and cumsum functions
% Note the lengths of z, zdiff, and zcumsum! (Fencepost problem)
z = [0 5 -2 3 4];
zdiff = diff(z);
zcumsum = cumsum(z);
%% Setup: A simple function
% Let's start with a simple example: y = x.^2. The domain is N points
% linearly sampled from lo to hi.
lo = -2;
hi = 2;
N = 1e2;
x = linspace(lo, hi, N);
y = x.^2;
plot(x, y);
title('x^2');
%% Numerical (Approximate) Derivatives
% We can calculate a difference quotient between each pair of (x,y) points
% using the diff() function.
dydx = diff(y)./diff(x); % difference quotient
figure();
plot(x(1:end-1), dydx);
%% Numerical (Approximate) Integrals
% Now suppose we want to approximate the cumulative integral (Riemann sum)
% of a function.
xdiff = diff(x);
dx = xdiff(1); % spacing between points
dx = (hi-lo) / (N-1); % alternative to the above (note: N-1)
Y = cumsum(y) * dx; % Riemann sum
figure();
plot(x, Y);
%% Error metrics: Check how close we are!
% dydx should be derivative of x.^2 = 2*x
dydx_actual = 2 * x;
% Y should be \int_{-2}^{x}{t.^2 dt}
Y_actual = (x .^3 - (-2)^3) / 3;
% Slightly more accurate -- can you figure out why?
% Y_actual = (x .^3 - (-2-dx)^3) / 3;
% Error metric: MSE (mean square error) or RMSE (root mean square error)
% Try changing N and see how the error changes. Try this with both the
% integral and derivative.
% estimated = dydx;
% actual = dydx_actual(1:end-1);
estimated = Y;
actual = Y_actual;
mse = mean((estimated - actual) .^ 2);
rmse = rms(estimated - actual);
%% Fundamental Theorem of Calculus
% Now, use the approximate derivative to get the original function, y back
% as yhat and plot it. You may need to use/create another variable for
% the x axis when plotting.
figure();
yhat = diff(Y)./diff(x); % differentiate Y
plot(x(1:end-1), yhat);
figure();
yhat2 = cumsum(dydx) * dx; % integrate dydx
plot(x(1:end-1), yhat2);

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%% Lesson 2a: More vector and matrix operations
%
% Objectives:
% * Understand how to perform vector operations in MATLAB
% * Understand arithmetic and basic functions in MATLAB
%% Vector operations
% In lesson 1, we saw how to create a vector with the colon operator and
% linspace. Now let's perform some operations on them!
%
% There are two common classes of operations that you can perform on vectors:
% element-wise operations (which produce another vector) and aggregate
% operations (which produce a scalar value). There are also many functions that
% don't fall under these categories, but these cover many of the common
% functions.
%% Element-wise operations
% Many operations that work on scalars (which are really degenerate matrices)
% also work element-wise on vectors (or matrices).
x = 0:0.01:2*pi; % Create a linearly-spaced vector
y = sin(x); % sin() works element-wise on vectors!
y = abs(x); % same with abs()!
y = x .^ 4; % element-wise power
y = power(x, 4); % same as above
plot(x, y); % Plot y vs. x (line graph)
title('y vs. x');
%% Aggregate operations
% Another common class of operations produce a single output or statistic about
% a vector (or matrix).
length(x); % number of elements in x
sum(x); % sum of the elements of x
mean(x); % average of the elements of x
min(x); % minimum element of x
diff(x); % difference between adjacent elements of x
%% Exercise 1 : Vector operations
T = 1e-6; % Sampling period (s)
t = 0:T:2e-3; % Time (domain/x-axis)
f0 = 50; % Initial frequency (Hz)
b = 10e6; % Chirp rate (Hz/s)
A = 10; % Amplitude
y1 = A * cos(2*pi*f0*t + pi*b*t.^2);
figure;
plot(t,y1);
%% Exercise: Numerical calculus
% See numerical_calculus.m.
%% Basic indexing in MATLAB
% The process of extracting values from a vector (or matrix) is called
% "indexing." In MATLAB, indices start at 1, rather than 0 in most languages
% (in which it is more of an "offset" than a cardinal index).
%% Exercise 2 : Basic indexing
% The syntax for indexing is "x(indices)", where x is the variable to index,
% and indices is a scalar or a vector of indices. There are many variations on
% this. Note that indices can be any vector
x(1); % first element of x
x(1:3); % elements 1, 2 and 3 (inclusive!)
x(1:length(x)); % all elements in x
x(1:end); % same as above
x(:); % same as above
x(end); % last element of x
x(3:end); % all elements from 3 onwards
x([1,3,5]); % elements 1, 3, and 5 from x
x(1:2:end); % all odd-indexed elements of x
ind = 1:2:length(x);
x(ind); % same as the previous example
%% Exercises to improve your understanding
% Take some time to go through these on your own.
x([1,2,3]); % Will these produce the same result?
x([3,2,1]);
x2 = 1:5;
x2(6); % What will this produce?
x2(0); % What will this produce?
x2(1:1.5:4); % What will this produce?
ind = 1:1.5:4;
x2(ind); % What will this produce?
z = 4;
z(1); % What will this produce?
%% Matrix operations
% Matrices is closely related to vectors, and we have also explored some matrix
% operations last class. This class, we are going to explore functions that are
% very useful but are hard to grasp for beginners, namely reshape, meshgrid,
% row-wise and column-wise operations.
%% Reshape
% Change a matrix from one shape to another. The new shape has to have the same
% number of elements as the original shape.
%
% When you are reshaping an array / matrix, the first dimension is filled
% first, and then the second dimension, so on and so forth. I.e., elements
% start filling down columns, then rows, etc.
M = 1:100;
N1 = reshape(M,2,2,[]); % It would create a 2*2*25 matrix
N2 = reshape(M,[2,2,25]); % Same as N1
N2(:,:,25); % Gives you 97,98,99,100
N2(:,1,25); % Gives you 97 and 98
%% Row-wise / Column-wise operations
% Vector operations can also be performed on matrices. We can perform a vector
% operation on each row/column of a matrix, or on a particular row/column by
% indexing.
H = magic(4); % create the magical matrix H
sum(H,1); % column wise sum, note that this is a row vector(default)
fliplr(H); % flip H from left to right
flipud(H); % flip H upside down
H(1,:) = fliplr(H(1,:)); % flip only ONE row left to right
H(1,:) = []; % delete the first row
%% Exercise 7 : Matrix Operations
H2 = randi(20,4,5); % random 4x5 matrix with integers from 1 to 20
sum(H2(:,2));
mean(H2(3,:));
C = reshape(H2,2,2,5);
C(2,:,:) = [];